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  5. LOC_Os03g04620

LOC_Os03g04620


Description : CCT motif family protein, expressed


Gene families : OG_42_0000610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g04620
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
Bradi1g75760 No alias CCT motif family protein 0.03 Orthogroups_2024-Update
Bradi4g45330 No alias CCT motif family protein 0.02 Orthogroups_2024-Update
Brara.D01142.1 No alias CMF transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G071320.1 No alias CMF transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G087180.4 No alias CMF transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G024330.1 No alias CMF transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g61900 No alias CCT motif family protein, expressed 0.02 Orthogroups_2024-Update
Potri.005G097700 No alias activator of spomin::LUC2 0.04 Orthogroups_2024-Update
Seita.3G212400.1 No alias CMF transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 313 355
No external refs found!