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  5. LOC_Os03g04770

LOC_Os03g04770


Description : beta-amylase, putative, expressed


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g04770
Cluster HCCA clusters: cluster_0033

Target Alias Description ECC score Gene Family Method Actions
A4A49_21375 No alias beta-amylase 0.02 Orthogroups_2024-Update
At2g45880 No alias Beta-amylase 7 [Source:UniProtKB/Swiss-Prot;Acc:O80831] 0.05 Orthogroups_2024-Update
At5g18670 No alias Inactive beta-amylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYW2] 0.03 Orthogroups_2024-Update
Glyma.05G068000 No alias chloroplast beta-amylase 0.04 Orthogroups_2024-Update
Glyma.13G215000 No alias beta-amylase 3 0.03 Orthogroups_2024-Update
HORVU1Hr1G038920.3 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU2Hr1G043920.3 No alias EC_3.2 glycosylase & beta amylase 0.02 Orthogroups_2024-Update
PSME_00013234-RA No alias (at3g23920 : 404.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
PSME_00015608-RA No alias (at4g17090 : 661.0) Encodes a beta-amylase targeted to... 0.02 Orthogroups_2024-Update
PSME_00030632-RA No alias (at3g23920 : 414.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
PSME_00053865-RA No alias (at3g23920 : 404.0) Encodes a chloroplast beta-amylase.... 0.03 Orthogroups_2024-Update
Pp1s121_168V6 No alias beta- 0.02 Orthogroups_2024-Update
Sobic.002G329400.1 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
Sopen09g034010 No alias Glycosyl hydrolase family 14 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan predictions
MF GO:0016161 beta-amylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 96 516
No external refs found!