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  5. LOC_Os03g06060

LOC_Os03g06060


Description : expansin precursor, putative, expressed


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g06060
Cluster HCCA clusters: cluster_0013

Target Alias Description ECC score Gene Family Method Actions
90332 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G073373 No alias expansin 11 0.02 Orthogroups_2024-Update
HORVU0Hr1G032890.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00036_0270 kfl00036_0270_v1.1 (q6zgu9|expa5_orysa : 123.0) Expansin-A5 precursor... 0.02 Orthogroups_2024-Update
MA_114349g0010 No alias (at1g26770 : 288.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
Mp1g24390.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Mp8g18860.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc07g063210 No alias Expansin (AHRD V3.3 *** G4XZZ0_9GENT) 0.02 Orthogroups_2024-Update
Sopen01g006710 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 59 135
IPR007117 Expansin_CBD 146 223
No external refs found!