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  5. LOC_Os03g06910

LOC_Os03g06910


Description : PPR repeat containing protein, expressed


Gene families : OG_42_0002181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g06910
Cluster HCCA clusters: cluster_0081

Target Alias Description ECC score Gene Family Method Actions
Solyc02g021280 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 500 532
IPR002885 Pentatricopeptide_repeat 290 323
IPR002885 Pentatricopeptide_repeat 326 358
IPR002885 Pentatricopeptide_repeat 155 200
IPR002885 Pentatricopeptide_repeat 364 412
IPR002885 Pentatricopeptide_repeat 539 586
IPR002885 Pentatricopeptide_repeat 434 482
IPR002885 Pentatricopeptide_repeat 224 273
IPR002885 Pentatricopeptide_repeat 613 646
No external refs found!