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  5. Solyc07g047640

Solyc07g047640


Description : LOW QUALITY:F-box protein (AHRD V3.3 *** W9SM54_9ROSA)


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g047640
Cluster HCCA clusters: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
A4A49_13045 No alias f-box protein cpr30 0.03 Orthogroups_2024-Update
A4A49_14296 No alias f-boxkelch-repeat protein 0.02 Orthogroups_2024-Update
Glyma.05G071700 No alias F-box family protein 0.02 Orthogroups_2024-Update
Glyma.08G352700 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.08G352900 No alias F-box family protein 0.04 Orthogroups_2024-Update
Glyma.16G163966 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.18G167700 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Glyma.18G168400 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Potri.001G181600 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Potri.007G130600 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Potri.011G121200 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.014G162600 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Solyc01g104940 No alias LOW QUALITY:F-box family protein, putative (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!