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  5. LOC_Os03g09910

LOC_Os03g09910


Description : aminotransferase, classes I and II, domain containing protein, expressed


Gene families : OG_42_0002938 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g09910
Cluster HCCA clusters: cluster_0041

Target Alias Description ECC score Gene Family Method Actions
Brara.A00436.1 No alias LL-diaminopimelate aminotransferase 0.03 Orthogroups_2024-Update
Brara.C04084.1 No alias aminotransferase *(ALD1) 0.02 Orthogroups_2024-Update
Seita.9G506400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G401700.1 No alias LL-diaminopimelate aminotransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 67 435
No external refs found!