-campesterol to brassicasterol (unlike CYP710A2).; cytochrome P450, family 710, subfamily A, polypeptide 1 (CYP710A1); FUNCTIONS IN: C-22 sterol desaturase activity, oxygen binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 2 (TAIR:AT2G34490.1); Has 25674 Blast hits to 25623 proteins in 1435 species: Archae - 46; Bacteria - 2777; Metazoa - 10394; Fungi - 4411; Plants - 7239; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)", "best_name": "evm.model.tig00001065.30", "tokens": null, "interpro": ["Cyt_P450", "Cyt_P450"], "family_name": "OG_42_0004177", "family_id": 963986, "family_url": "/family/view/963986", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#53A", "family_shape": "ellipse", "lc_label": "OG_42_0000369;OG_42_0004177;Cyt_P450;OG_42_0000231", "lc_color": "#AE8", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021582.39", "name": "evm.model.tig00021582.39", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 154758, "gene_name": "evm.model.tig00021582.39", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/154758", "color": "#CCC", "shape": "ellipse", "description": "(at5g06530 : 263.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 167.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 526.0) & (original description: no original description)", "best_name": "evm.model.tig00021582.39", "tokens": null, "interpro": ["ABC_2_trans", "ABC_transporter-like"], "family_name": "OG_42_0000429", "family_id": 960238, "family_url": "/family/view/960238", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FDE", "family_shape": "vee", "lc_label": "OG_42_0000390;ABC_2_trans;OG_42_0000076;OG_42_0000429;OG_42_0005572;ABC_transporter-like;ABC1_TM_dom", "lc_color": "#0FC", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000113.89", "name": "evm.model.tig00000113.89", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 132346, "gene_name": "evm.model.tig00000113.89", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/132346", "color": "#CCC", "shape": "ellipse", "description": "(at1g80300 : 232.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 228.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 462.0) & (original description: no original description)", "best_name": "evm.model.tig00000113.89", "tokens": null, "interpro": ["ADP_ATP_car"], "family_name": "OG_42_0050956", "family_id": 1010765, "family_url": "/family/view/1010765", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#C61", "family_shape": "rhomboid", "lc_label": "ADP_ATP_car;OG_42_0050955;OG_42_0050956", "lc_color": "#02C", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021582.12", "name": "evm.model.tig00021582.12", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 154729, "gene_name": "evm.model.tig00021582.12", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/154729", "color": "#CCC", "shape": "ellipse", "description": "(q8li34|myst1_orysa : 388.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (at5g64610 : 387.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 774.0) & (original description: no original description)", "best_name": "evm.model.tig00021582.12", "tokens": null, "interpro": ["Tudor-knot", "Glyco_trans_1", "Glyco_trans_4-like_N", "HAT_MYST-type"], "family_name": "OG_42_0003802", "family_id": 963611, "family_url": "/family/view/963611", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#724", "family_shape": "roundrectangle", "lc_label": "OG_42_0001050;HAT_MYST-type;Glyco_trans_4-like_N;Glyco_trans_1;OG_42_0003802;Tudor-knot;Starch_synth_cat_dom;OG_42_0001451;OG_42_0002520", "lc_color": "#8C2", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000802.18", "name": "evm.model.tig00000802.18", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139526, "gene_name": "evm.model.tig00000802.18", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139526", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000802.18", "tokens": null, "family_name": "OG_42_0055420", "family_id": 1015229, "family_url": "/family/view/1015229", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#AF2", "family_shape": "roundrectangle", "lc_label": "OG_42_0055420", "lc_color": "#AF2", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001224.18", "name": "evm.model.tig00001224.18", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 142586, "gene_name": "evm.model.tig00001224.18", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/142586", "color": "#CCC", "shape": "ellipse", "description": "(at3g26060 : 110.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (reliability: 220.0) & (original description: no original description)", "best_name": "evm.model.tig00001224.18", "tokens": null, "interpro": ["AhpC/TSA"], "family_name": "OG_42_0003448", "family_id": 963257, "family_url": "/family/view/963257", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#76B", "family_shape": "roundrectangle", "lc_label": "OG_42_0003448;AhpC/TSA", "lc_color": "#76B", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020943.73", "name": "evm.model.tig00020943.73", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 149574, "gene_name": "evm.model.tig00020943.73", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/149574", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020943.73", "tokens": null, "interpro": ["bHLH_dom"], "family_name": "OG_42_0061391", "family_id": 1021200, "family_url": "/family/view/1021200", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#39E", "family_shape": "vee", "lc_label": "F-box_dom;OG_42_0002411;OG_42_0061391;bHLH_dom;OG_42_0052225;OG_42_0003493;PAS", "lc_color": "#596", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021127.131", "name": "evm.model.tig00021127.131", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 151607, "gene_name": "evm.model.tig00021127.131", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/151607", "color": "#CCC", "shape": "ellipse", "description": "(at1g50450 : 201.0) Saccharopine dehydrogenase ; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097), NAD(P)-binding domain (InterPro:IPR016040); Has 1549 Blast hits to 1547 proteins in 500 species: Archae - 22; Bacteria - 980; Metazoa - 33; Fungi - 88; Plants - 49; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description)", "best_name": "evm.model.tig00021127.131", "tokens": null, "interpro": ["Sacchrp_dh_NADP"], "family_name": "OG_42_0004789", "family_id": 964598, "family_url": "/family/view/964598", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#2B6", "family_shape": "octagon", "lc_label": "Sacchrp_dh_NADP;OG_42_0004789", "lc_color": "#856", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001339.14", "name": "evm.model.tig00001339.14", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143066, "gene_name": "evm.model.tig00001339.14", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143066", "color": "#CCC", "shape": "ellipse", "description": "(at4g24520 : 87.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (q05001|ncpr_catro : 83.6) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 161.8) & (original description: no original description)", "best_name": "evm.model.tig00001339.14", "tokens": null, "interpro": ["CysJ-like_FAD-binding", "OxRdtase_FAD/NAD-bd", "Flavodoxin/NO_synth"], "family_name": "OG_42_0017965", "family_id": 977774, "family_url": "/family/view/977774", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#793", "family_shape": "diamond", "lc_label": "CysJ-like_FAD-binding;OG_42_0017965;OG_42_0001658;Flavodoxin/NO_synth;OxRdtase_FAD/NAD-bd", "lc_color": "#A44", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001126.5", "name": "evm.model.tig00001126.5", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 142108, "gene_name": "evm.model.tig00001126.5", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/142108", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00001126.5", "tokens": null, "family_name": "OG_42_0056838", "family_id": 1016647, "family_url": "/family/view/1016647", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#D8D", "family_shape": "rhomboid", "lc_label": "OG_42_0056838", "lc_color": "#D8D", "lc_shape": "rhomboid", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000241.128", "name": "evm.model.tig00000241.128", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134363, "gene_name": "evm.model.tig00000241.128", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134363", "color": "#CCC", "shape": "ellipse", "description": "(at3g45780 : 80.1) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description)", "best_name": "evm.model.tig00000241.128", "tokens": null, "interpro": ["bHLH_dom", "PAS", "PAS"], "family_name": "OG_42_0052225", "family_id": 1012034, "family_url": "/family/view/1012034", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FE9", "family_shape": "hexagon", "lc_label": "F-box_dom;OG_42_0002411;OG_42_0061391;bHLH_dom;OG_42_0052225;OG_42_0003493;PAS", "lc_color": "#596", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000889.39", "name": "evm.model.tig00000889.39", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 140539, "gene_name": "evm.model.tig00000889.39", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/140539", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000889.39", "tokens": null, "interpro": ["SUMF_dom", "DinB-like"], "family_name": "OG_42_0010743", "family_id": 970552, "family_url": "/family/view/970552", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#E09", "family_shape": "triangle", "lc_label": "OG_42_0010743;DinB-like;SUMF_dom", "lc_color": "#E09", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020614.73", "name": "evm.model.tig00020614.73", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 146228, "gene_name": "evm.model.tig00020614.73", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/146228", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020614.73", "tokens": null, "interpro": ["PAP/fibrillin_dom", "PAP/fibrillin_dom"], "family_name": "OG_42_0007335", "family_id": 967144, "family_url": "/family/view/967144", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#7CD", "family_shape": "octagon", "lc_label": "PAP/fibrillin_dom;OG_42_0007335", "lc_color": "#B19", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020961.121", "name": "evm.model.tig00020961.121", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 149889, "gene_name": "evm.model.tig00020961.121", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/149889", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020961.121", "tokens": null, "family_name": "OG_42_0061610", "family_id": 1021419, "family_url": "/family/view/1021419", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#890", "family_shape": "hexagon", "lc_label": "OG_42_0061610", "lc_color": "#890", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000248.16", "name": "evm.model.tig00000248.16", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134570, "gene_name": "evm.model.tig00000248.16", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134570", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000248.16", "tokens": null, "interpro": ["For/NO2_transpt", "For/NO2_transpt"], "family_name": "OG_42_0011080", "family_id": 970889, "family_url": "/family/view/970889", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#0AF", "family_shape": "rhomboid", "lc_label": "OG_42_0011080;For/NO2_transpt", "lc_color": "#0AF", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021179.40", "name": "evm.model.tig00021179.40", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 152090, "gene_name": "evm.model.tig00021179.40", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/152090", "color": "#CCC", "shape": "ellipse", "description": "(at2g44990 : 100.0) More Axillary Branching; carotenoid cleavage dioxygenases.; carotenoid cleavage dioxygenase 7 (CCD7); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 6 (TAIR:AT3G24220.1); Has 211 Blast hits to 206 proteins in 62 species: Archae - 2; Bacteria - 69; Metazoa - 8; Fungi - 31; Plants - 96; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)", "best_name": "evm.model.tig00021179.40", "tokens": null, "interpro": ["Carotenoid_Oase"], "family_name": "OG_42_0004953", "family_id": 964762, "family_url": "/family/view/964762", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#8CE", "family_shape": "triangle", "lc_label": "OG_42_0004953;Carotenoid_Oase;OG_42_0000424", "lc_color": "#8CE", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021434.66", "name": "evm.model.tig00021434.66", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 153761, "gene_name": "evm.model.tig00021434.66", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/153761", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021434.66", "tokens": null, "family_name": "OG_42_0064105", "family_id": 1023914, "family_url": "/family/view/1023914", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#5C4", "family_shape": "vee", "lc_label": "OG_42_0064105", "lc_color": "#5C4", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021332.11", "name": "evm.model.tig00021332.11", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 152981, "gene_name": "evm.model.tig00021332.11", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/152981", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021332.11", "tokens": null, "family_name": "OG_42_0063643", "family_id": 1023452, "family_url": "/family/view/1023452", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#76D", "family_shape": "triangle", "lc_label": "OG_42_0063643", "lc_color": "#76D", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021318.33", "name": "evm.model.tig00021318.33", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 152801, "gene_name": "evm.model.tig00021318.33", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/152801", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021318.33", "tokens": null, "interpro": ["DUF4436"], "family_name": "OG_42_0063550", "family_id": 1023359, "family_url": "/family/view/1023359", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#AE5", "family_shape": "roundrectangle", "lc_label": "OG_42_0063550;DUF4436", "lc_color": "#AE5", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000241.121", "name": "evm.model.tig00000241.121", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134356, "gene_name": "evm.model.tig00000241.121", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134356", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000241.121", "tokens": null, "family_name": "OG_42_0052220", "family_id": 1012029, "family_url": "/family/view/1012029", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#2A0", "family_shape": "octagon", "lc_label": "OG_42_0052220", "lc_color": "#2A0", "lc_shape": "rhomboid", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020830.55", "name": "evm.model.tig00020830.55", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 148146, "gene_name": "evm.model.tig00020830.55", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/148146", "color": "#CCC", "shape": "ellipse", "description": "(at1g16720 : 103.0) Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA. Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits. The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.; high chlorophyll fluorescence phenotype 173 (HCF173); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: photosystem II assembly, translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G18810.2); Has 1950 Blast hits to 1792 proteins in 453 species: Archae - 27; Bacteria - 1263; Metazoa - 9; Fungi - 6; Plants - 464; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description)", "best_name": "evm.model.tig00020830.55", "tokens": null, "interpro": ["NAD(P)-bd_dom", "NAD(P)-bd_dom", "NADH-UbQ_OxRdtase-assoc_prot30"], "family_name": "OG_42_0005535", "family_id": 965344, "family_url": "/family/view/965344", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#834", "family_shape": "rhomboid", "lc_label": "NADH-UbQ_OxRdtase-assoc_prot30;NAD(P)-bd_dom;OG_42_0005535", "lc_color": "#4F3", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021350.15", "name": "evm.model.tig00021350.15", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 153226, "gene_name": "evm.model.tig00021350.15", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/153226", "color": "#CCC", "shape": "ellipse", "description": "(at1g80030 : 317.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (q04960|dnjh_cucsa : 112.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 634.0) & (original description: no original description)", "best_name": "evm.model.tig00021350.15", "tokens": null, "interpro": ["HSP_DnaJ_Cys-rich_dom", "DnaJ_C", "DnaJ_domain"], "family_name": "OG_42_0001512", "family_id": 961321, "family_url": "/family/view/961321", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#23B", "family_shape": "diamond", "lc_label": "HSP_DnaJ_Cys-rich_dom;DnaJ_C;OG_42_0008976;DnaJ_domain;OG_42_0001512;OG_42_0002087;OG_42_0007359;OG_42_0001356", "lc_color": "#8A8", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021222.6", "name": "evm.model.tig00021222.6", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 152214, "gene_name": "evm.model.tig00021222.6", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/152214", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021222.6", "tokens": null, "interpro": ["Glyco_trans_1", "Glyco_trans_4-like_N"], "family_name": "OG_42_0002520", "family_id": 962329, "family_url": "/family/view/962329", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#12A", "family_shape": "vee", "lc_label": "OG_42_0001050;HAT_MYST-type;Glyco_trans_4-like_N;Glyco_trans_1;OG_42_0003802;Tudor-knot;Starch_synth_cat_dom;OG_42_0001451;OG_42_0002520", "lc_color": "#8C2", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020965.70", "name": "evm.model.tig00020965.70", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 150128, "gene_name": "evm.model.tig00020965.70", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/150128", "color": "#CCC", "shape": "ellipse", "description": "(q651u1|cryd_orysa : 216.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (at5g24850 : 212.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description)", "best_name": "evm.model.tig00020965.70", "tokens": null, "interpro": ["Cryptochr/Photolyase_FAD-bd"], "family_name": "OG_42_0001991", "family_id": 961800, "family_url": "/family/view/961800", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F79", "family_shape": "diamond", "lc_label": "Cryptochr/Photolyase_FAD-bd;DNA_photolyase_N;OG_42_0001991;OG_42_0005942", "lc_color": "#350", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000055.1", "name": "evm.model.tig00000055.1", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 131470, "gene_name": "evm.model.tig00000055.1", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/131470", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000055.1", "tokens": null, "interpro": ["Amino_oxidase"], "family_name": "OG_42_0050410", "family_id": 1010219, "family_url": "/family/view/1010219", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#E92", "family_shape": "hexagon", "lc_label": "OG_42_0050410;OG_42_0006853;Amino_oxidase", "lc_color": "#E92", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000204.73", "name": "evm.model.tig00000204.73", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 133875, "gene_name": "evm.model.tig00000204.73", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/133875", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000204.73", "tokens": null, "interpro": ["Neur_chan_lig-bd"], "family_name": "OG_42_0051933", "family_id": 1011742, "family_url": "/family/view/1011742", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#F1C", "family_shape": "ellipse", "lc_label": "OG_42_0051933;Neur_chan_lig-bd", "lc_color": "#F1C", "lc_shape": "diamond", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020723.8", "name": "evm.model.tig00020723.8", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 147322, "gene_name": "evm.model.tig00020723.8", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/147322", "color": "#CCC", "shape": "ellipse", "description": "(at1g57770 : 171.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)", "best_name": "evm.model.tig00020723.8", "tokens": null, "family_name": "OG_42_0005062", "family_id": 964871, "family_url": "/family/view/964871", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#6EF", "family_shape": "ellipse", "lc_label": "OG_42_0005062", "lc_color": "#6EF", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000093.128", "name": "evm.model.tig00000093.128", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 131968, "gene_name": "evm.model.tig00000093.128", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/131968", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000093.128", "tokens": null, "interpro": ["SDR_fam"], "family_name": "OG_42_0006156", "family_id": 965965, "family_url": "/family/view/965965", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#C41", "family_shape": "triangle", "lc_label": "OG_42_0006156;SDR_fam;OG_42_0000285", "lc_color": "#C41", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000241.47", "name": "evm.model.tig00000241.47", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134473, "gene_name": "evm.model.tig00000241.47", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134473", "color": "#CCC", "shape": "ellipse", "description": "(at2g42640 : 100.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Mitogen activated protein kinase kinase kinase-related (TAIR:AT3G58640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)", "best_name": "evm.model.tig00000241.47", "tokens": null, "interpro": ["Ser-Thr/Tyr_kinase_cat_dom", "Prot_kinase_dom"], "family_name": "OG_42_0052270", "family_id": 1012079, "family_url": "/family/view/1012079", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#524", "family_shape": "roundrectangle", "lc_label": "Leu-rich_rpt;NAF_dom;PB1_dom;LRR_N_plant-typ;OG_42_0000488;Ser-Thr/Tyr_kinase_cat_dom;OG_42_0064353;OG_42_0052270;OG_42_0000034;Prot_kinase_dom;OG_42_0000989;OG_42_0003103", "lc_color": "#9E8", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001408.12", "name": "evm.model.tig00001408.12", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143343, "gene_name": "evm.model.tig00001408.12", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143343", "color": "#CCC", "shape": "ellipse", "description": "(at2g40840 : 591.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06801|dpep_soltu : 87.8) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 1182.0) & (original description: no original description)", "best_name": "evm.model.tig00001408.12", "tokens": null, "interpro": ["CBM_fam20", "CBM_fam20", "Glyco_hydro_77"], "family_name": "OG_42_0003066", "family_id": 962875, "family_url": "/family/view/962875", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A3C", "family_shape": "hexagon", "lc_label": "Glyco_hydro_77;OG_42_0003066;CBM_fam20", "lc_color": "#88F", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "always_show"}}, {"data": {"id": "evm.model.tig00020909.15", "name": "evm.model.tig00020909.15", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 148887, "gene_name": "evm.model.tig00020909.15", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/148887", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020909.15", "tokens": null, "family_name": "OG_42_0060969", "family_id": 1020778, "family_url": "/family/view/1020778", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#D23", "family_shape": "rhomboid", "lc_label": "OG_42_0060969", "lc_color": "#D23", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001368.12", "name": "evm.model.tig00001368.12", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143176, "gene_name": "evm.model.tig00001368.12", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143176", "color": "#CCC", "shape": "ellipse", "description": "(at1g04420 : 203.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (q40648|kcab_orysa : 80.9) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: no original description)", "best_name": "evm.model.tig00001368.12", "tokens": null, "interpro": ["NADP_OxRdtase_dom"], "family_name": "OG_42_0002528", "family_id": 962337, "family_url": "/family/view/962337", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#34E", "family_shape": "rhomboid", "lc_label": "OG_42_0002528;NADP_OxRdtase_dom", "lc_color": "#34E", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000227.54", "name": "evm.model.tig00000227.54", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134256, "gene_name": "evm.model.tig00000227.54", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134256", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000227.54", "tokens": null, "family_name": "OG_42_0052169", "family_id": 1011978, "family_url": "/family/view/1011978", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#72B", "family_shape": "vee", "lc_label": "OG_42_0052169", "lc_color": "#72B", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020943.4", "name": "evm.model.tig00020943.4", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 149537, "gene_name": "evm.model.tig00020943.4", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/149537", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020943.4", "tokens": null, "interpro": ["CBD2"], "family_name": "OG_42_0061368", "family_id": 1021177, "family_url": "/family/view/1021177", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#C85", "family_shape": "hexagon", "lc_label": "CBD2;OG_42_0061368", "lc_color": "#6BF", "lc_shape": "diamond", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001231.6", "name": "evm.model.tig00001231.6", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 142632, "gene_name": "evm.model.tig00001231.6", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/142632", "color": "#CCC", "shape": "ellipse", "description": "(at1g71840 : 114.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 91198 Blast hits to 35247 proteins in 911 species: Archae - 70; Bacteria - 10066; Metazoa - 38021; Fungi - 19388; Plants - 11732; Viruses - 0; Other Eukaryotes - 11921 (source: NCBI BLink). & (q39336|gblp_brana : 96.3) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (reliability: 222.0) & (original description: no original description)", "best_name": "evm.model.tig00001231.6", "tokens": null, "interpro": ["WD40_repeat", "WD40_repeat", "WD40_repeat", "WD40_repeat", "WD40_repeat", "WD40_repeat", "WD40_repeat", "WD40_repeat", "WD40_repeat", "5peptide_repeat"], "family_name": "OG_42_0003601", "family_id": 963410, "family_url": "/family/view/963410", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#6D7", "family_shape": "vee", "lc_label": "5peptide_repeat;WD40_repeat;OG_42_0000717;OG_42_0003601", "lc_color": "#CCC", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000808.38", "name": "evm.model.tig00000808.38", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139678, "gene_name": "evm.model.tig00000808.38", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139678", "color": "#CCC", "shape": "ellipse", "description": "(at4g27270 : 149.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)", "best_name": "evm.model.tig00000808.38", "tokens": null, "interpro": ["FMN_Rdtase-like"], "family_name": "OG_42_0000594", "family_id": 960403, "family_url": "/family/view/960403", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#93D", "family_shape": "octagon", "lc_label": "OG_42_0000594;FMN_Rdtase-like", "lc_color": "#93D", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000949.10", "name": "evm.model.tig00000949.10", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 140851, "gene_name": "evm.model.tig00000949.10", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/140851", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000949.10", "tokens": null, "interpro": ["Hypoxia_induced_domain"], "family_name": "OG_42_0056139", "family_id": 1015948, "family_url": "/family/view/1015948", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#4A2", "family_shape": "ellipse", "lc_label": "Hypoxia_induced_domain;OG_42_0056139", "lc_color": "#EE6", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000144.22", "name": "evm.model.tig00000144.22", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 132815, "gene_name": "evm.model.tig00000144.22", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/132815", "color": "#CCC", "shape": "ellipse", "description": "(at4g39280 : 500.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (reliability: 1000.0) & (original description: no original description)", "best_name": "evm.model.tig00000144.22", "tokens": null, "interpro": ["Phenylalanyl-tRNA_Synthase"], "family_name": "OG_42_0005773", "family_id": 965582, "family_url": "/family/view/965582", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#97E", "family_shape": "rectangle", "lc_label": "OG_42_0005773;Phenylalanyl-tRNA_Synthase", "lc_color": "#97E", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020710.100", "name": "evm.model.tig00020710.100", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 147082, "gene_name": "evm.model.tig00020710.100", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/147082", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020710.100", "tokens": null, "interpro": ["GNAT_dom"], "family_name": "OG_42_0059799", "family_id": 1019608, "family_url": "/family/view/1019608", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#C43", "family_shape": "roundrectangle", "lc_label": "OG_42_0059799;GNAT_dom;OG_42_0006937", "lc_color": "#C43", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021012.26", "name": "evm.model.tig00021012.26", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 150262, "gene_name": "evm.model.tig00021012.26", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/150262", "color": "#CCC", "shape": "ellipse", "description": "(at5g24850 : 151.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651u1|cryd_orysa : 149.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (reliability: 302.0) & (original description: no original description)", "best_name": "evm.model.tig00021012.26", "tokens": null, "interpro": ["Cryptochr/Photolyase_FAD-bd", "DNA_photolyase_N"], "family_name": "OG_42_0001991", "family_id": 961800, "family_url": "/family/view/961800", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F79", "family_shape": "diamond", "lc_label": "Cryptochr/Photolyase_FAD-bd;DNA_photolyase_N;OG_42_0001991;OG_42_0005942", "lc_color": "#350", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001126.4", "name": "evm.model.tig00001126.4", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 142107, "gene_name": "evm.model.tig00001126.4", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/142107", "color": "#CCC", "shape": "ellipse", "description": "(at5g49890 : 120.0) member of Anion channel protein family; chloride channel C (CLC-C); FUNCTIONS IN: anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Voltage-gated chloride channel family protein (TAIR:AT5G33280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)", "best_name": "evm.model.tig00001126.4", "tokens": null, "interpro": ["Cl-channel_volt-gated"], "family_name": "OG_42_0016018", "family_id": 975827, "family_url": "/family/view/975827", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#E70", "family_shape": "octagon", "lc_label": "OG_42_0016018;Cl-channel_volt-gated", "lc_color": "#E70", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020675.11", "name": "evm.model.tig00020675.11", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 146590, "gene_name": "evm.model.tig00020675.11", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/146590", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020675.11", "tokens": null, "interpro": ["Voltage-dep_anion_channel"], "family_name": "OG_42_0013700", "family_id": 973509, "family_url": "/family/view/973509", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#95C", "family_shape": "rectangle", "lc_label": "Voltage-dep_anion_channel;OG_42_0013700", "lc_color": "#124", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020943.67", "name": "evm.model.tig00020943.67", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 149567, "gene_name": "evm.model.tig00020943.67", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/149567", "color": "#CCC", "shape": "ellipse", "description": "(at4g24520 : 358.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (q05001|ncpr_catro : 357.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 716.0) & (original description: no original description)", "best_name": "evm.model.tig00020943.67", "tokens": null, "interpro": ["OxRdtase_FAD/NAD-bd", "Flavodoxin/NO_synth", "CysJ-like_FAD-binding"], "family_name": "OG_42_0001658", "family_id": 961467, "family_url": "/family/view/961467", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F3A", "family_shape": "hexagon", "lc_label": "CysJ-like_FAD-binding;OG_42_0017965;OG_42_0001658;Flavodoxin/NO_synth;OxRdtase_FAD/NAD-bd", "lc_color": "#A44", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020675.17", "name": "evm.model.tig00020675.17", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 146604, "gene_name": "evm.model.tig00020675.17", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/146604", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020675.17", "tokens": null, "interpro": ["Lipocln_cytosolic_FA-bd_dom"], "family_name": "OG_42_0003241", "family_id": 963050, "family_url": "/family/view/963050", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#205", "family_shape": "diamond", "lc_label": "Lipocln_cytosolic_FA-bd_dom;OG_42_0003241", "lc_color": "#BED", "lc_shape": "rhomboid", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000204.72", "name": "evm.model.tig00000204.72", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 133874, "gene_name": "evm.model.tig00000204.72", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/133874", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000204.72", "tokens": null, "family_name": "OG_42_0051932", "family_id": 1011741, "family_url": "/family/view/1011741", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#F39", "family_shape": "diamond", "lc_label": "OG_42_0051932", "lc_color": "#F39", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020556.13", "name": "evm.model.tig00020556.13", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 145035, "gene_name": "evm.model.tig00020556.13", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/145035", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020556.13", "tokens": null, "family_name": "OG_42_0058474", "family_id": 1018283, "family_url": "/family/view/1018283", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#D94", "family_shape": "ellipse", "lc_label": "OG_42_0058474", "lc_color": "#D94", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021038.97", "name": "evm.model.tig00021038.97", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 150788, "gene_name": "evm.model.tig00021038.97", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/150788", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021038.97", "tokens": null, "family_name": "OG_42_0062217", "family_id": 1022026, "family_url": "/family/view/1022026", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#3B0", "family_shape": "rectangle", "lc_label": "OG_42_0062217", "lc_color": "#3B0", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020909.30", "name": "evm.model.tig00020909.30", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 148904, "gene_name": "evm.model.tig00020909.30", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/148904", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020909.30", "tokens": null, "family_name": "OG_42_0016130", "family_id": 975939, "family_url": "/family/view/975939", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#96A", "family_shape": "hexagon", "lc_label": "OG_42_0016130", "lc_color": "#96A", "lc_shape": "diamond", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00022075.63", "name": "evm.model.tig00022075.63", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 155656, "gene_name": "evm.model.tig00022075.63", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/155656", "color": "#CCC", "shape": "ellipse", "description": "(at3g19260 : 109.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q6eun0|ascl1_orysa : 95.1) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: no original description)", "best_name": "evm.model.tig00022075.63", "tokens": null, "interpro": ["TLC-dom"], "family_name": "OG_42_0001012", "family_id": 960821, "family_url": "/family/view/960821", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#3AE", "family_shape": "triangle", "lc_label": "OG_42_0001012;TLC-dom", "lc_color": "#3AE", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "always_show"}}, {"data": {"id": "evm.model.tig00000737.24", "name": "evm.model.tig00000737.24", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139053, "gene_name": "evm.model.tig00000737.24", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139053", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000737.24", "tokens": null, "interpro": ["Pentatricopeptide_repeat", "Pentatricopeptide_repeat"], "family_name": "OG_42_0004106", "family_id": 963915, "family_url": "/family/view/963915", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#CF6", "family_shape": "ellipse", "lc_label": "OG_42_0006481;OG_42_0004106;Pentatricopeptide_repeat", "lc_color": "#783", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020943.5", "name": "evm.model.tig00020943.5", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 149548, "gene_name": "evm.model.tig00020943.5", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/149548", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020943.5", "tokens": null, "interpro": ["Glyco_hydro_5"], "family_name": "OG_42_0021266", "family_id": 981075, "family_url": "/family/view/981075", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#18A", "family_shape": "rectangle", "lc_label": "OG_42_0021266;Glyco_hydro_5", "lc_color": "#18A", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001339.13", "name": "evm.model.tig00001339.13", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143065, "gene_name": "evm.model.tig00001339.13", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143065", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00001339.13", "tokens": null, "family_name": "OG_42_0017964", "family_id": 977773, "family_url": "/family/view/977773", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#562", "family_shape": "triangle", "lc_label": "OG_42_0017964", "lc_color": "#562", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001093.1", "name": "evm.model.tig00001093.1", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 141925, "gene_name": "evm.model.tig00001093.1", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/141925", "color": "#CCC", "shape": "ellipse", "description": "(at5g39710 : 179.0) EMBRYO DEFECTIVE 2745 (EMB2745); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 65335 Blast hits to 15466 proteins in 320 species: Archae - 6; Bacteria - 88; Metazoa - 1398; Fungi - 1479; Plants - 59659; Viruses - 0; Other Eukaryotes - 2705 (source: NCBI BLink). & (q76c99|rf1_orysa : 152.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 358.0) & (original description: no original description)", "best_name": "evm.model.tig00001093.1", "tokens": null, "interpro": ["Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat"], "family_name": "OG_42_0006481", "family_id": 966290, "family_url": "/family/view/966290", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#783", "family_shape": "rectangle", "lc_label": "OG_42_0006481;OG_42_0004106;Pentatricopeptide_repeat", "lc_color": "#783", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000113.88", "name": "evm.model.tig00000113.88", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 132345, "gene_name": "evm.model.tig00000113.88", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/132345", "color": "#CCC", "shape": "ellipse", "description": "(at1g80300 : 174.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 174.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 346.0) & (original description: no original description)", "best_name": "evm.model.tig00000113.88", "tokens": null, "interpro": ["ADP_ATP_car"], "family_name": "OG_42_0050955", "family_id": 1010764, "family_url": "/family/view/1010764", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#276", "family_shape": "triangle", "lc_label": "ADP_ATP_car;OG_42_0050955;OG_42_0050956", "lc_color": "#02C", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000241.11", "name": "evm.model.tig00000241.11", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134343, "gene_name": "evm.model.tig00000241.11", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134343", "color": "#CCC", "shape": "ellipse", "description": "(q04960|dnjh_cucsa : 387.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 384.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (reliability: 768.0) & (original description: no original description)", "best_name": "evm.model.tig00000241.11", "tokens": null, "interpro": ["DnaJ_domain", "HSP_DnaJ_Cys-rich_dom", "DnaJ_C"], "family_name": "OG_42_0001356", "family_id": 961165, "family_url": "/family/view/961165", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A96", "family_shape": "diamond", "lc_label": "HSP_DnaJ_Cys-rich_dom;DnaJ_C;OG_42_0008976;DnaJ_domain;OG_42_0001512;OG_42_0002087;OG_42_0007359;OG_42_0001356", "lc_color": "#8A8", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000241.48", "name": "evm.model.tig00000241.48", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134474, "gene_name": "evm.model.tig00000241.48", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134474", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000241.48", "tokens": null, "family_name": "OG_42_0052271", "family_id": 1012080, "family_url": "/family/view/1012080", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#F64", "family_shape": "rectangle", "lc_label": "OG_42_0052271", "lc_color": "#F64", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020592.4", "name": "evm.model.tig00020592.4", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 145722, "gene_name": "evm.model.tig00020592.4", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/145722", "color": "#CCC", "shape": "ellipse", "description": "(at1g30400 : 169.0) glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)", "best_name": "evm.model.tig00020592.4", "tokens": null, "interpro": ["ABC_transporter-like", "ABC_transporter-like"], "family_name": "OG_42_0000076", "family_id": 959885, "family_url": "/family/view/959885", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#1B8", "family_shape": "hexagon", "lc_label": "OG_42_0000390;ABC_2_trans;OG_42_0000076;OG_42_0000429;OG_42_0005572;ABC_transporter-like;ABC1_TM_dom", "lc_color": "#0FC", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "always_show"}}, {"data": {"id": "evm.model.tig00000219.43", "name": "evm.model.tig00000219.43", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134145, "gene_name": "evm.model.tig00000219.43", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134145", "color": "#CCC", "shape": "ellipse", "description": "(at3g04870 : 558.0) Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.; zeta-carotene desaturase (ZDS); FUNCTIONS IN: carotene 7,8-desaturase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Carotene 7,8-desaturase (InterPro:IPR014103); BEST Arabidopsis thaliana protein match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ztp4|zds_maize : 541.0) Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) - Zea mays (Maize) & (reliability: 1116.0) & (original description: no original description)", "best_name": "evm.model.tig00000219.43", "tokens": null, "interpro": ["Amino_oxidase"], "family_name": "OG_42_0006853", "family_id": 966662, "family_url": "/family/view/966662", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#71C", "family_shape": "rectangle", "lc_label": "OG_42_0050410;OG_42_0006853;Amino_oxidase", "lc_color": "#E92", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000792.58", "name": "evm.model.tig00000792.58", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139470, "gene_name": "evm.model.tig00000792.58", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139470", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000792.58", "tokens": null, "family_name": "OG_42_0055392", "family_id": 1015201, "family_url": "/family/view/1015201", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#D37", "family_shape": "roundrectangle", "lc_label": "OG_42_0055392", "lc_color": "#D37", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000241.86", "name": "evm.model.tig00000241.86", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134516, "gene_name": "evm.model.tig00000241.86", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134516", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000241.86", "tokens": null, "family_name": "OG_42_0006389", "family_id": 966198, "family_url": "/family/view/966198", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#E8F", "family_shape": "ellipse", "lc_label": "OG_42_0006389", "lc_color": "#E8F", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000441.16", "name": "evm.model.tig00000441.16", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 136516, "gene_name": "evm.model.tig00000441.16", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/136516", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000441.16", "tokens": null, "interpro": ["Mitochondrial_sb/sol_carrier"], "family_name": "OG_42_0053541", "family_id": 1013350, "family_url": "/family/view/1013350", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#373", "family_shape": "rectangle", "lc_label": "OG_42_0003164;Mitochondrial_sb/sol_carrier;OG_42_0053541;OG_42_0003172", "lc_color": "#E92", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000900.16", "name": "evm.model.tig00000900.16", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 140574, "gene_name": "evm.model.tig00000900.16", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/140574", "color": "#CCC", "shape": "ellipse", "description": "(at4g17740 : 295.0) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: thylakoid, thylakoid lumen, mitochondrion, chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 9160 Blast hits to 9150 proteins in 1973 species: Archae - 0; Bacteria - 5658; Metazoa - 14; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3335 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description)", "best_name": "evm.model.tig00000900.16", "tokens": null, "interpro": ["Tail-specific_protease"], "family_name": "OG_42_0001329", "family_id": 961138, "family_url": "/family/view/961138", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#4CD", "family_shape": "diamond", "lc_label": "Tail-specific_protease;OG_42_0001329", "lc_color": "#BC8", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020723.3", "name": "evm.model.tig00020723.3", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 147267, "gene_name": "evm.model.tig00020723.3", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/147267", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020723.3", "tokens": null, "interpro": ["Thioredoxin_domain"], "family_name": "OG_42_0059906", "family_id": 1019715, "family_url": "/family/view/1019715", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#369", "family_shape": "ellipse", "lc_label": "OG_42_0059906;Thioredoxin_domain", "lc_color": "#369", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021373.7", "name": "evm.model.tig00021373.7", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 153492, "gene_name": "evm.model.tig00021373.7", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/153492", "color": "#CCC", "shape": "ellipse", "description": "(at3g45010 : 309.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (p37891|cbp3_orysa : 303.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (reliability: 618.0) & (original description: no original description)", "best_name": "evm.model.tig00021373.7", "tokens": null, "interpro": ["Peptidase_S10"], "family_name": "OG_42_0001569", "family_id": 961378, "family_url": "/family/view/961378", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#BB5", "family_shape": "roundrectangle", "lc_label": "OG_42_0001569;Peptidase_S10", "lc_color": "#BB5", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000113.87", "name": "evm.model.tig00000113.87", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 132344, "gene_name": "evm.model.tig00000113.87", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/132344", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000113.87", "tokens": null, "family_name": "OG_42_0050954", "family_id": 1010763, "family_url": "/family/view/1010763", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#CC1", "family_shape": "diamond", "lc_label": "OG_42_0050954", "lc_color": "#CC1", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000219.42", "name": "evm.model.tig00000219.42", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134144, "gene_name": "evm.model.tig00000219.42", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134144", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000219.42", "tokens": null, "interpro": ["UPF0060", "UPF0060"], "family_name": "OG_42_0011475", "family_id": 971284, "family_url": "/family/view/971284", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#BA4", "family_shape": "triangle", "lc_label": "OG_42_0011475;UPF0060", "lc_color": "#BA4", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000219.71", "name": "evm.model.tig00000219.71", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134176, "gene_name": "evm.model.tig00000219.71", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134176", "color": "#CCC", "shape": "ellipse", "description": "(at3g17040 : 170.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 159.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (reliability: 340.0) & (original description: no original description)", "best_name": "evm.model.tig00000219.71", "tokens": null, "family_name": "OG_42_0021044", "family_id": 980853, "family_url": "/family/view/980853", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#A3B", "family_shape": "vee", "lc_label": "OG_42_0021044", "lc_color": "#A3B", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000073.69", "name": "evm.model.tig00000073.69", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 131744, "gene_name": "evm.model.tig00000073.69", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/131744", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000073.69", "tokens": null, "interpro": ["TPR_1", "TPR-4"], "family_name": "OG_42_0007026", "family_id": 966835, "family_url": "/family/view/966835", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#934", "family_shape": "rhomboid", "lc_label": "TPR-4;TPR_1;OG_42_0007026", "lc_color": "#137", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020934.28", "name": "evm.model.tig00020934.28", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 149330, "gene_name": "evm.model.tig00020934.28", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/149330", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020934.28", "tokens": null, "family_name": "OG_42_0061223", "family_id": 1021032, "family_url": "/family/view/1021032", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#ADC", "family_shape": "rectangle", "lc_label": "OG_42_0061223", "lc_color": "#ADC", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001408.1", "name": "evm.model.tig00001408.1", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143340, "gene_name": "evm.model.tig00001408.1", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143340", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00001408.1", "tokens": null, "interpro": ["GTP_CycHdrlase_I_dom"], "family_name": "OG_42_0003628", "family_id": 963437, "family_url": "/family/view/963437", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#967", "family_shape": "ellipse", "lc_label": "GTP_CycHdrlase_I_dom;OG_42_0003628", "lc_color": "#A2D", "lc_shape": "diamond", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000361.58", "name": "evm.model.tig00000361.58", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 135492, "gene_name": "evm.model.tig00000361.58", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/135492", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000361.58", "tokens": null, "family_name": "OG_42_0003609", "family_id": 963418, "family_url": "/family/view/963418", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#598", "family_shape": "triangle", "lc_label": "OG_42_0003609", "lc_color": "#598", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021432.52", "name": "evm.model.tig00021432.52", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 153643, "gene_name": "evm.model.tig00021432.52", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/153643", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021432.52", "tokens": null, "family_name": "OG_42_0008332", "family_id": 968141, "family_url": "/family/view/968141", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#231", "family_shape": "vee", "lc_label": "OG_42_0008332", "lc_color": "#231", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000912.22", "name": "evm.model.tig00000912.22", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 140677, "gene_name": "evm.model.tig00000912.22", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/140677", "color": "#CCC", "shape": "ellipse", "description": "(at5g08650 : 735.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe64|efgm_orysa : 84.7) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (reliability: 1470.0) & (original description: no original description)", "best_name": "evm.model.tig00000912.22", "tokens": null, "interpro": ["EFTu-like_2", "LepA_CTD", "TF_GTP-bd_dom", "EFG_V-like"], "family_name": "OG_42_0002904", "family_id": 962713, "family_url": "/family/view/962713", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#726", "family_shape": "rhomboid", "lc_label": "EFTu-like_2;LepA_CTD;OG_42_0002904;EFG_V-like;TF_GTP-bd_dom", "lc_color": "#3E6", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020825.7", "name": "evm.model.tig00020825.7", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 148030, "gene_name": "evm.model.tig00020825.7", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/148030", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020825.7", "tokens": null, "family_name": "OG_42_0060453", "family_id": 1020262, "family_url": "/family/view/1020262", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#DA0", "family_shape": "rectangle", "lc_label": "OG_42_0060453", "lc_color": "#DA0", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001071.14", "name": "evm.model.tig00001071.14", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 141812, "gene_name": "evm.model.tig00001071.14", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/141812", "color": "#CCC", "shape": "ellipse", "description": "(at3g63520 : 102.0) Encodes a protein with 9-
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
