LOC_Os03g12030

Description : 3-ketoacyl-CoA synthase, putative, expressed

Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g12030
Cluster	HCCA clusters: cluster_0124

Target	Alias	Description	ECC score	Gene Family Method
231244	No alias	3-ketoacyl-CoA synthase 4	0.02	Orthogroups_2024-Update
A4A49_04047	No alias	3-ketoacyl-coa synthase 6	0.02	Orthogroups_2024-Update
Bradi1g44010	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Bradi1g68430	No alias	3-ketoacyl-CoA synthase 1	0.02	Orthogroups_2024-Update
Bradi1g69637	No alias	3-ketoacyl-CoA synthase 6	0.04	Orthogroups_2024-Update
Bradi1g72560	No alias	3-ketoacyl-CoA synthase 10	0.03	Orthogroups_2024-Update
Bradi2g16050	No alias	3-ketoacyl-CoA synthase 4	0.04	Orthogroups_2024-Update
Bradi3g07730	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Brara.B00145.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Brara.D01590.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Glyma.03G260300	No alias	3-ketoacyl-CoA synthase 1	0.03	Orthogroups_2024-Update
Glyma.04G057800	No alias	3-ketoacyl-CoA synthase 10	0.03	Orthogroups_2024-Update
Glyma.20G210900	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
HORVU5Hr1G056870.5	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
LOC_Os05g49290	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g49900	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g14810	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00008960-RA	No alias	(at2g26640 : 707.0) Encodes KCS11, a member of the...	0.02	Orthogroups_2024-Update
Potri.002G178000	No alias	3-ketoacyl-CoA synthase 1	0.04	Orthogroups_2024-Update
Potri.010G125300	No alias	3-ketoacyl-CoA synthase 6	0.04	Orthogroups_2024-Update
Potri.018G032200	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Pp1s66_69V6	No alias	beta-ketoacyl-coa synthase family protein	0.01	Orthogroups_2024-Update
Pp1s8_88V6	No alias	beta-ketoacyl- synthase	0.02	Orthogroups_2024-Update
Sobic.001G453200.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Sobic.001G495500.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Solyc06g053900	No alias	3-ketoacyl-CoA synthase (AHRD V3.3 *** K4C677_SOLLC)	0.03	Orthogroups_2024-Update
Solyc09g065780	No alias	3-ketoacyl-CoA synthase (AHRD V3.3 *** K4CUK4_SOLLC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	InterProScan predictions
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004474	malate synthase activity	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006097	glyoxylate cycle	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0006826	iron ion transport	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0034755	iron ion transmembrane transport	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0046487	glyoxylate metabolic process	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	384	464
IPR013601	FAE1_typ3_polyketide_synth	79	367

External Links

No external refs found!

LOC_Os03g12030

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation