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  5. LOC_Os03g12350

LOC_Os03g12350


Description : two-component response regulator, putative, expressed


Gene families : OG_42_0000401 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g12350
Cluster HCCA clusters: cluster_0051

Target Alias Description ECC score Gene Family Method Actions
A4A49_13098 No alias two-component response regulator orr24 0.03 Orthogroups_2024-Update
At4g31920 No alias Two-component response regulator ARR10... 0.02 Orthogroups_2024-Update
Brara.E02480.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.03 Orthogroups_2024-Update
Brara.G02561.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.03 Orthogroups_2024-Update
Glyma.07G243300 No alias response regulator 2 0.04 Orthogroups_2024-Update
HORVU4Hr1G066480.1 No alias B-type ARR response activator of cytokinin signalling &... 0.03 Orthogroups_2024-Update
PSME_00025688-RA No alias (at4g16110 : 251.0) Encodes a pollen-specific... 0.02 Orthogroups_2024-Update
Seita.9G485100.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.03 Orthogroups_2024-Update
Sobic.004G066600.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.02 Orthogroups_2024-Update
Sobic.004G330900.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.03 Orthogroups_2024-Update
Solyc01g065540 No alias Two-component response regulator (AHRD V3.3 *** W9RS74_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 204 252
IPR001789 Sig_transdc_resp-reg_receiver 18 126
No external refs found!