1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g12940

LOC_Os03g12940


Description : OsFBO13 - F-box and other domain containing protein, expressed


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g12940
Cluster HCCA clusters: cluster_0062

Target Alias Description ECC score Gene Family Method Actions
A4A49_32017 No alias transcription factor bhlh79 0.02 Orthogroups_2024-Update
A4A49_35201 No alias transcription factor hbi1 0.02 Orthogroups_2024-Update
Brara.A02620.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Glyma.17G232285 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
PSME_00000014-RA No alias (at1g68920 : 227.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00019949-RA No alias (at1g68920 : 206.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Sobic.001G105000.1 No alias regulatory protein (CIB) of blue light perception &... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 637 685
IPR001810 F-box_dom 342 384
No external refs found!