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  5. LOC_Os03g13100

LOC_Os03g13100


Description : ariadne-1, putative, expressed


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g13100
Cluster HCCA clusters: cluster_0141

Target Alias Description ECC score Gene Family Method Actions
At3g27710 No alias Probable E3 ubiquitin-protein ligase ARI3... 0.04 Orthogroups_2024-Update
Brara.J00404.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.J00407.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.13G343300 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G089940.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Pp1s9_199V6 No alias protein ariadne- 0.02 Orthogroups_2024-Update
Sobic.001G162900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc06g073340 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G05890.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 208 270
IPR002867 IBR_dom 286 327
No external refs found!