LOC_Os03g14170

Description : 3-ketoacyl-CoA synthase, putative, expressed

Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g14170
Cluster	HCCA clusters: cluster_0088

Target	Alias	Description	ECC score	Gene Family Method
231244	No alias	3-ketoacyl-CoA synthase 4	0.02	Orthogroups_2024-Update
79947	No alias	3-ketoacyl-CoA synthase 4	0.02	Orthogroups_2024-Update
At2g16280	No alias	3-ketoacyl-CoA synthase 9...	0.03	Orthogroups_2024-Update
At5g49070	No alias	Probable 3-ketoacyl-CoA synthase 21...	0.04	Orthogroups_2024-Update
Bradi2g16050	No alias	3-ketoacyl-CoA synthase 4	0.02	Orthogroups_2024-Update
Brara.F03791.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Brara.G02519.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
GRMZM2G409312	No alias	3-ketoacyl-CoA synthase 6	0.02	Orthogroups_2024-Update
GRMZM2G445602	No alias	3-ketoacyl-CoA synthase 10	0.03	Orthogroups_2024-Update
Glyma.03G260300	No alias	3-ketoacyl-CoA synthase 1	0.02	Orthogroups_2024-Update
Glyma.10G241700	No alias	3-ketoacyl-CoA synthase 6	0.02	Orthogroups_2024-Update
LOC_Os05g49290	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.03	Orthogroups_2024-Update
MA_105806g0010	No alias	(at2g26640 : 701.0) Encodes KCS11, a member of the...	0.03	Orthogroups_2024-Update
Potri.010G125300	No alias	3-ketoacyl-CoA synthase 6	0.02	Orthogroups_2024-Update
Potri.015G133700	No alias	3-ketoacyl-CoA synthase 6	0.02	Orthogroups_2024-Update
Pp1s416_17V6	No alias	beta-ketoacyl-coa synthase family protein	0.02	Orthogroups_2024-Update
Pp1s8_88V6	No alias	beta-ketoacyl- synthase	0.02	Orthogroups_2024-Update
Seita.2G184500.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.04	Orthogroups_2024-Update
Sobic.001G453200.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Sopen03g021100	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update
Sopen06g024120	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update
Sopen08g021190	No alias	FAE1/Type III polyketide synthase-like protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	InterProScan predictions
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
MF	GO:0003883	CTP synthase activity	IEP	Predicted GO
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	417	498
IPR013601	FAE1_typ3_polyketide_synth	111	399

External Links

No external refs found!

LOC_Os03g14170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation