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  5. LOC_Os03g14600

LOC_Os03g14600


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g14600
Cluster HCCA clusters: cluster_0013

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G093900 No alias BED zinc finger ;hAT family dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.06G265900 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
Glyma.08G097600 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
Glyma.17G167500 No alias BED zinc finger ;hAT family dimerisation domain 0.02 Orthogroups_2024-Update
LOC_Os05g50624 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR003656 Znf_BED 223 279
IPR025525 hAT-like_transposase_RNase-H 603 702
IPR008906 HATC_C_dom 752 840
No external refs found!