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  5. LOC_Os03g15590

LOC_Os03g15590


Description : eukaryotic translation initiation factor, putative, expressed


Gene families : OG_42_0004894 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g15590
Cluster HCCA clusters: cluster_0076


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003743 translation initiation factor activity IEA InterProScan predictions
CC GO:0005737 cytoplasm IEA InterProScan predictions
BP GO:0006413 translational initiation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902562 H4 histone acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 50 207
No external refs found!