1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g049300

Solyc07g049300


Description : Endoglucanase (AHRD V3.3 *** M0ZJ27_SOLTU)


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g049300
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AC203408.4_FG003 No alias glycosyl hydrolase 9B10 0.03 Orthogroups_2024-Update
At1g64390 No alias Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059] 0.03 Orthogroups_2024-Update
Bradi2g11870 No alias glycosyl hydrolase 9B13 0.03 Orthogroups_2024-Update
Bradi4g35970 No alias glycosyl hydrolase 9B18 0.02 Orthogroups_2024-Update
Bradi5g26010 No alias glycosyl hydrolase 9C1 0.03 Orthogroups_2024-Update
Brara.B02223.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C02262.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E01094.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F03887.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03367.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I01325.1 No alias class-C endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Glyma.05G216400 No alias glycosyl hydrolase 9C2 0.02 Orthogroups_2024-Update
Glyma.06G056900 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Glyma.09G231800 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
HORVU6Hr1G073570.3 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
LOC_Os02g05744 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g50040 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
MA_42717g0010 No alias (at4g11050 : 801.0) glycosyl hydrolase 9C3 (GH9C3);... 0.03 Orthogroups_2024-Update
PSME_00013360-RA No alias (at1g02800 : 658.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
PSME_00018616-RA No alias (q69sg5|gun24_orysa : 617.0) Endoglucanase 24 precursor... 0.03 Orthogroups_2024-Update
PSME_00036164-RA No alias (at1g48930 : 712.0) glycosyl hydrolase 9C1 (GH9C1);... 0.03 Orthogroups_2024-Update
Potri.003G139600 No alias glycosyl hydrolase 9C2 0.04 Orthogroups_2024-Update
Potri.014G157600 No alias glycosyl hydrolase 9B8 0.04 Orthogroups_2024-Update
Pp1s376_19V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.2G287600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G133700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen09g004950 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 28 488
No external refs found!