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  5. LOC_Os03g16670

LOC_Os03g16670


Description : haloacid dehalogenase-like hydrolase family protein, putative, expressed


Gene families : OG_42_0000537 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g16670
Cluster HCCA clusters: cluster_0127

Target Alias Description ECC score Gene Family Method Actions
At2g32150 No alias At2g32150/F22D22.10 [Source:UniProtKB/TrEMBL;Acc:Q9SKY5] 0.03 Orthogroups_2024-Update
Brara.C01088.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I04289.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01323.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.19G222500 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
PSME_00020007-RA No alias (at3g62040 : 264.0) Haloacid dehalogenase-like hydrolase... 0.03 Orthogroups_2024-Update
PSME_00020008-RA No alias (at3g62040 : 240.0) Haloacid dehalogenase-like hydrolase... 0.03 Orthogroups_2024-Update
Potri.006G086900 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G089300 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
Pp1s164_92V6 No alias catalytic hydrolase 0.02 Orthogroups_2024-Update
Seita.9G127000.1 No alias xanthosine monophosphate phosphatase *(XMPP) 0.05 Orthogroups_2024-Update
Solyc09g010940 No alias Haloacid dehalogenase-like hydrolase (AHRD V3.3 *** I3S857_MEDTR) 0.03 Orthogroups_2024-Update
Sopen09g005660 No alias Haloacid dehalogenase-like hydrolase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!