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Description : pentatricopeptide, putative, expressed
Gene families : OG_42_0010050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os03g17510 | |
| Cluster | HCCA clusters: cluster_0120 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sobic.001G412200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
| BP | GO:0006096 | glycolytic process | IEP | Predicted GO |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Predicted GO |
| BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
| BP | GO:0006757 | ATP generation from ADP | IEP | Predicted GO |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Predicted GO |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
| BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Predicted GO |
| BP | GO:0046031 | ADP metabolic process | IEP | Predicted GO |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Predicted GO |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 420 | 467 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 319 |
| IPR002885 | Pentatricopeptide_repeat | 394 | 414 |
| IPR002885 | Pentatricopeptide_repeat | 183 | 210 |
| IPR002885 | Pentatricopeptide_repeat | 322 | 349 |
| IPR002885 | Pentatricopeptide_repeat | 260 | 287 |
| IPR002885 | Pentatricopeptide_repeat | 155 | 181 |
| IPR002885 | Pentatricopeptide_repeat | 495 | 518 |
| No external refs found! |