1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g17540

LOC_Os03g17540


Description : TBC domain containing protein, expressed


Gene families : OG_42_0002469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002469_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g17540
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G154883 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.03 Orthogroups_2024-Update
Kfl00109_0190 kfl00109_0190_v1.1 (at3g55020 : 442.0) Ypt/Rab-GAP domain of gyp1p... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 94 313
No external refs found!