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  5. LOC_Os03g19250

LOC_Os03g19250


Description : AMP-binding enzyme, putative, expressed


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g19250
Cluster HCCA clusters: cluster_0060

Target Alias Description ECC score Gene Family Method Actions
At1g65880 No alias Benzoate--CoA ligase, peroxisomal... 0.02 Orthogroups_2024-Update
At3g16910 No alias Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.02 Orthogroups_2024-Update
At5g16340 No alias Probable acyl-activating enzyme 6... 0.03 Orthogroups_2024-Update
Bradi1g76157 No alias acyl activating enzyme 1 0.02 Orthogroups_2024-Update
GRMZM2G110616 No alias acyl activating enzyme 1 0.02 Orthogroups_2024-Update
Glyma.02G239300 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.14G208200 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
MA_10434335g0020 No alias (at1g65890 : 547.0) acyl activating enzyme 12 (AAE12);... 0.03 Orthogroups_2024-Update
PSME_00029032-RA No alias (at5g16370 : 627.0) acyl activating enzyme 5 (AAE5);... 0.02 Orthogroups_2024-Update
PSME_00057252-RA No alias (at1g65880 : 600.0) Encodes a benzoate-CoA ligase.... 0.02 Orthogroups_2024-Update
Potri.005G250700 No alias acyl activating enzyme 1 0.02 Orthogroups_2024-Update
Sobic.006G265000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc02g037490 No alias AMP-dependent synthetase and ligase family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 474 553
IPR000873 AMP-dep_Synth/Lig 33 465
No external refs found!