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  5. LOC_Os03g19610

LOC_Os03g19610


Description : pectinesterase, putative, expressed


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g19610
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G299300 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G048280.2 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
MA_10428625g0010 No alias (at3g29090 : 374.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
Mp3g01170.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00014679-RA No alias (at5g19730 : 298.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00015802-RA No alias (at5g19730 : 209.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00046573-RA No alias (at5g19730 : 519.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Pp1s198_26V6 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
Pp1s446_3V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.2G137200.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.003G143600.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 59 336
No external refs found!