LOC_Os03g19900

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g19900
Cluster	HCCA clusters: cluster_0125

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00099	No alias	floral homeotic protein apetala 2	0.02	Orthogroups_2024-Update
A4A49_28363	No alias	ap2-like ethylene-responsive transcription factor ail5	0.02	Orthogroups_2024-Update
GRMZM2G124524	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.02G207100	No alias	ARIA-interacting double AP2 domain protein	0.03	Orthogroups_2024-Update
Glyma.04G047900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.05G091200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G220800	No alias	ARIA-interacting double AP2 domain protein	0.03	Orthogroups_2024-Update
Glyma.08G227700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.09G240400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.15G221600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
PSME_00036178-RA	No alias	(at4g18520 : 129.0) Pentatricopeptide repeat (PPR)...	0.03	Orthogroups_2024-Update
Potri.001G018400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G011600	No alias	AINTEGUMENTA-like 6	0.02	Orthogroups_2024-Update
Potri.016G084500	No alias	related to AP2.7	0.02	Orthogroups_2024-Update
Potri.018G091600	No alias	AINTEGUMENTA-like 5	0.02	Orthogroups_2024-Update
Pp1s131_139V6	No alias	ap2 domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.7G263000.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
Solyc02g092050	No alias	AP2-like ethylene-responsive transcription factor (AHRD...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	295	345

External Links

No external refs found!

LOC_Os03g19900

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation