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  5. LOC_Os03g20090

LOC_Os03g20090


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g20090
Cluster HCCA clusters: cluster_0012

Target Alias Description ECC score Gene Family Method Actions
A4A49_00243 No alias transcription factor myb39 0.02 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_19615 No alias transcription repressor myb4 0.03 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
At3g01140 No alias Myb domain protein 106 [Source:UniProtKB/TrEMBL;Acc:F4J2A8] 0.02 Orthogroups_2024-Update
Bradi2g48521 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g36370 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Brara.A03667.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.A03854.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Brara.C01651.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.E00069.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02266.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Brara.H01124.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I02176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.I04780.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K01834.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G096358 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Glyma.01G222200 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.02G247100 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.06G312900 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Glyma.08G168100 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Glyma.10G010300 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
Glyma.10G165800 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.12G079800 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Glyma.12G106400 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.13G333200 No alias myb domain protein 48 0.02 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Glyma.19G038100 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.19G061600 No alias myb domain protein 24 0.02 Orthogroups_2024-Update
HORVU1Hr1G074260.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.02 Orthogroups_2024-Update
HORVU2Hr1G028470.5 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.05 Orthogroups_2024-Update
MA_10432903g0010 No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_93127g0010 No alias (at4g38620 : 220.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_9374017g0010 No alias (at3g02940 : 238.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
Mp3g23170.1 No alias transcription factor (MYB) 0.01 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00035153-RA No alias (at3g02940 : 237.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00044287-RA No alias (at4g05100 : 216.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00052620-RA No alias (at3g13540 : 220.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
Potri.001G036000 No alias myb domain protein 65 0.02 Orthogroups_2024-Update
Potri.002G038500 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.006G221200 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.008G081600 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Potri.012G084100 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Seita.3G232500.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G135700.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G384800.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G142300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sopen05g004090 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g001300 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 22 69
IPR001005 SANT/Myb 75 118
No external refs found!