LOC_Os03g20190

Description : pentatricopeptide, putative, expressed

Gene families : OG_42_0008731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008731_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g20190
Cluster	HCCA clusters: cluster_0084

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
BP	GO:0007034	vacuolar transport	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	571	696
IPR002885	Pentatricopeptide_repeat	397	444
IPR002885	Pentatricopeptide_repeat	173	205
IPR002885	Pentatricopeptide_repeat	371	392
IPR002885	Pentatricopeptide_repeat	269	296
IPR002885	Pentatricopeptide_repeat	113	142
IPR002885	Pentatricopeptide_repeat	300	329
IPR002885	Pentatricopeptide_repeat	50	78
IPR002885	Pentatricopeptide_repeat	206	235
IPR002885	Pentatricopeptide_repeat	472	497
IPR002885	Pentatricopeptide_repeat	237	265

External Links

No external refs found!