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Description : VQ domain containing protein, putative, expressed
Gene families : OG_42_0002624 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002624_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os03g20330 | |
| Cluster | HCCA clusters: cluster_0020 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_04928 | No alias | hypothetical protein | 0.05 | Orthogroups_2024-Update | |
| A4A49_20961 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
| At2g41180 | No alias | Sigma factor binding protein 2, chloroplastic... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g64050 | No alias | sigma factor binding protein 1 | 0.03 | Orthogroups_2024-Update | |
| Brara.C02105.1 | No alias | WRKY33-activating protein *(SIB) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os05g32460 | No alias | VQ domain containing protein, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| Potri.001G029700 | No alias | sigma factor binding protein 1 | 0.03 | Orthogroups_2024-Update | |
| Potri.003G194700 | No alias | sigma factor binding protein 1 | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G390700.1 | No alias | WRKY33-activating protein *(SIB) | 0.02 | Orthogroups_2024-Update | |
| Solyc01g096510 | No alias | LOW QUALITY:VQ motif-containing protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Predicted GO |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0004560 | alpha-L-fucosidase activity | IEP | Predicted GO |
| MF | GO:0004834 | tryptophan synthase activity | IEP | Predicted GO |
| MF | GO:0005215 | transporter activity | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006812 | cation transport | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Predicted GO |
| MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
| MF | GO:0009916 | alternative oxidase activity | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0015928 | fucosidase activity | IEP | Predicted GO |
| CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predicted GO |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Predicted GO |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
| CC | GO:0044425 | membrane part | IEP | Predicted GO |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008889 | VQ | 49 | 75 |
| No external refs found! |