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  5. Solyc01g080910

Solyc01g080910


Description : LOW QUALITY:polyadenylate-binding protein 1-B-binding protein (AHRD V3.3 *** AT4G19950.1)


Gene families : OG_42_0001381 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001381_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g080910
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G242400 No alias Function unknown 0.05 Orthogroups_2024-Update
MA_14222g0010 No alias (at1g31130 : 169.0) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
MA_181915g0010 No alias (at1g31130 : 218.0) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
MA_55130g0010 No alias (at4g19950 : 218.0) unknown protein; BEST Arabidopsis... 0.03 Orthogroups_2024-Update
MA_77119g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_8215665g0010 No alias (at4g19950 : 200.0) unknown protein; BEST Arabidopsis... 0.03 Orthogroups_2024-Update
Sobic.003G325700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!