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  5. LOC_Os03g20700

LOC_Os03g20700


Description : magnesium-chelatase, putative, expressed


Gene families : OG_42_0006102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g20700
Cluster HCCA clusters: cluster_0010

Target Alias Description ECC score Gene Family Method Actions
A4A49_01880 No alias magnesium-chelatase subunit chlh, chloroplastic 0.02 Orthogroups_2024-Update
At5g13630 No alias Magnesium-chelatase subunit ChlH, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g19220 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.05 Orthogroups_2024-Update
Brara.C00575.1 No alias abscisic acid perception modulator *(ABAR) & component... 0.02 Orthogroups_2024-Update
Cre07.g325500 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.02 Orthogroups_2024-Update
Glyma.03G137000 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.07 Orthogroups_2024-Update
Glyma.10G097800 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.07 Orthogroups_2024-Update
Glyma.19G139300 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.06 Orthogroups_2024-Update
HORVU2Hr1G023560.2 No alias component *(CHLH) of magnesium-chelatase complex &... 0.08 Orthogroups_2024-Update
Kfl00137_0250 kfl00137_0250_v1.1 (at5g13630 : 2070.0) Encodes magnesium chelatase... 0.02 Orthogroups_2024-Update
Mp8g10280.1 No alias component CHL-H of magnesium-chelatase complex. ABAR... 0.02 Orthogroups_2024-Update
Potri.006G051100 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.03 Orthogroups_2024-Update
Pp1s348_32V6 No alias magnesium chelatase h subunit 0.03 Orthogroups_2024-Update
Seita.7G217800.1 No alias abscisic acid perception modulator *(ABAR) & component... 0.05 Orthogroups_2024-Update
Sobic.006G264900.1 No alias component *(CHLH) of magnesium-chelatase complex &... 0.08 Orthogroups_2024-Update
Solyc04g015750 No alias Magnesium chelatase H subunit (AHRD V3.3 *** F8SPG3_CAMSI) 0.07 Orthogroups_2024-Update
Sopen04g007830 No alias CobN/Magnesium Chelatase 0.05 Orthogroups_2024-Update
evm.model.tig00020554.18 No alias (at5g13630 : 1562.0) Encodes magnesium chelatase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0016851 magnesium chelatase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003672 CobN/Mg_chltase 250 1367
IPR022571 Mg_chelatase_H_N 85 246
No external refs found!