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  5. Solyc01g080920

Solyc01g080920


Description : LOW QUALITY:U-box domain-containing protein (AHRD V3.3 *** A0A0K9PSS4_ZOSMR)


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g080920
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_34426 No alias e3 ubiquitin-protein ligase pub24 0.04 Orthogroups_2024-Update
At1g49780 No alias U-box domain-containing protein 26... 0.03 Orthogroups_2024-Update
Bradi5g27660 No alias CYS, MET, PRO, and GLY protein 2 0.02 Orthogroups_2024-Update
Brara.D00589.1 No alias E3 ubiquitin ligase 0.07 Orthogroups_2024-Update
GRMZM2G071484 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Glyma.04G212300 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Glyma.05G189600 No alias CYS, MET, PRO, and GLY protein 2 0.03 Orthogroups_2024-Update
Glyma.09G172100 No alias CYS, MET, PRO, and GLY protein 1 0.03 Orthogroups_2024-Update
Glyma.10G262600 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Glyma.12G095000 No alias plant U-box 24 0.04 Orthogroups_2024-Update
HORVU4Hr1G064070.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G089590.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os02g34410 No alias U-box domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g46500 No alias U-box, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g13740 No alias immediate-early fungal elicitor protein CMPG1, putative,... 0.02 Orthogroups_2024-Update
LOC_Os04g58920 No alias U-box domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430196g0010 No alias (at2g35930 : 192.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
MA_10432179g0010 No alias (at3g52450 : 121.0) Encodes a cytoplasmically localized... 0.04 Orthogroups_2024-Update
MA_415393g0010 No alias (at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS... 0.03 Orthogroups_2024-Update
MA_8030489g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00056516-RA No alias (at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS... 0.04 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.04 Orthogroups_2024-Update
Potri.005G189800 No alias plant U-box 29 0.02 Orthogroups_2024-Update
Potri.007G110600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G016100 No alias plant U-box 24 0.05 Orthogroups_2024-Update
Potri.009G016200 No alias plant U-box 23 0.02 Orthogroups_2024-Update
Potri.012G042600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
Seita.7G095100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G274933.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g007010 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc01g009320 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc06g074140 No alias LOW QUALITY:U-box domain-containing family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 29 100
No external refs found!