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  5. LOC_Os03g21820

LOC_Os03g21820


Description : expansin precursor, putative, expressed


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g21820
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
143857 No alias expansin A4 0.02 Orthogroups_2024-Update
179212 No alias expansin A15 0.02 Orthogroups_2024-Update
231226 No alias expansin A9 0.02 Orthogroups_2024-Update
91129 No alias expansin A15 0.03 Orthogroups_2024-Update
A4A49_33199 No alias expansin-a15 0.03 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.02 Orthogroups_2024-Update
AC234190.1_FG001 No alias expansin A17 0.02 Orthogroups_2024-Update
At1g69530 No alias AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241] 0.03 Orthogroups_2024-Update
At2g37640 No alias EXP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VPK3] 0.02 Orthogroups_2024-Update
At2g40610 No alias EXPA8 [Source:UniProtKB/TrEMBL;Acc:A0A178VTJ9] 0.02 Orthogroups_2024-Update
At5g56320 No alias expansin A14 [Source:TAIR;Acc:AT5G56320] 0.03 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.02 Orthogroups_2024-Update
Brara.C02080.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E02601.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Glyma.04G021600 No alias expansin 11 0.02 Orthogroups_2024-Update
Glyma.11G160000 No alias expansin A8 0.03 Orthogroups_2024-Update
Kfl00857_0040 kfl00857_0040_v1.1 (at1g12560 : 155.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
MA_4979g0010 No alias (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
Potri.001G240900 No alias expansin A4 0.03 Orthogroups_2024-Update
Potri.008G088300 No alias expansin A1 0.03 Orthogroups_2024-Update
Potri.016G135200 No alias expansin A8 0.03 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.02 Orthogroups_2024-Update
Seita.3G204900.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Seita.7G029300.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Seita.9G535700.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sopen04g035500 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 150
IPR007117 Expansin_CBD 162 245
No external refs found!