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  5. LOC_Os03g22420

LOC_Os03g22420


Description : AAA-type ATPase family protein, putative, expressed


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g22420
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
440620 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Bradi1g62731 No alias AAA-type ATPase family protein 0.04 Orthogroups_2024-Update
Brara.C02807.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G435582 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
Glyma.04G194900 No alias AAA-type ATPase family protein 0.04 Orthogroups_2024-Update
Kfl00036_0350 kfl00036_0350_v1.1 (at4g02480 : 517.0) AAA-type ATPase family protein;... 0.03 Orthogroups_2024-Update
Kfl00036_0360 kfl00036_0360_v1.1 (at4g02480 : 695.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Kfl00238_0170 kfl00238_0170_v1.1 (at1g02890 : 595.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
MA_93384g0010 No alias (at4g02480 : 1067.0) AAA-type ATPase family protein;... 0.03 Orthogroups_2024-Update
Potri.002G205900 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
Seita.5G011600.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.9G407500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G375100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G413000.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G207500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen06g035910 No alias ATPase family associated with various cellular activities (AAA) 0.02 Orthogroups_2024-Update
evm.model.tig00000655.31 No alias (at3g19740 : 192.0) P-loop containing nucleoside... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 846 975
No external refs found!