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  5. LOC_Os03g22810

LOC_Os03g22810


Description : copper/zinc superoxide dismutase, putative, expressed


Gene families : OG_42_0001339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g22810
Cluster HCCA clusters: cluster_0124

Target Alias Description ECC score Gene Family Method Actions
Brara.G01354.1 No alias copper/zinc superoxide dismutase *(CSD) & EC_1.15... 0.02 Orthogroups_2024-Update
LOC_Os08g44770 No alias copper/zinc superoxide dismutase, putative, expressed 0.03 Orthogroups_2024-Update
Solyc01g067740 No alias Superoxide dismutase [Cu-Zn] 1 0.02 Orthogroups_2024-Update
evm.model.tig00000342.1 No alias (p23346|sodc5_maize : 164.0) Superoxide dismutase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001424 SOD_Cu_Zn_dom 130 266
No external refs found!