1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g052170

Solyc07g052170


Description : LOW QUALITY:Dirigent protein (AHRD V3.3 *** K4CFB6_SOLLC)


Gene families : OG_42_0000072 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g052170
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
139600 No alias Disease resistance-responsive (dirigent-like protein)... 0.02 Orthogroups_2024-Update
Bradi4g24110 No alias Disease resistance-responsive (dirigent-like protein)... 0.02 Orthogroups_2024-Update
Brara.A03244.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.07G157100 No alias Disease resistance-responsive (dirigent-like protein)... 0.03 Orthogroups_2024-Update
HORVU5Hr1G019400.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G019480.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10426515g0010 No alias (at1g22900 : 89.7) Disease resistance-responsive... 0.02 Orthogroups_2024-Update
MA_10426515g0020 No alias (at1g22900 : 97.4) Disease resistance-responsive... 0.02 Orthogroups_2024-Update
MA_10427702g0010 No alias (at1g22900 : 86.7) Disease resistance-responsive... 0.02 Orthogroups_2024-Update
MA_71201g0010 No alias (at1g22900 : 93.6) Disease resistance-responsive... 0.02 Orthogroups_2024-Update
Potri.001G023800 No alias Disease resistance-responsive (dirigent-like protein)... 0.03 Orthogroups_2024-Update
Seita.7G285300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G056400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G056500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G122800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen10g025050 No alias Dirigent-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004265 Dirigent 31 174
No external refs found!