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  5. LOC_Os03g25550

LOC_Os03g25550


Description : myb-like DNA-binding domain containing protein, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g25550
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
At1g57560 No alias At1g57560 [Source:UniProtKB/TrEMBL;Acc:Q9C695] 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.02 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi5g15246 No alias myb domain protein 79 0.02 Orthogroups_2024-Update
GRMZM2G011422 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G160840 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
Glyma.03G221700 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.06G003800 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Glyma.08G336500 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
Glyma.20G209700 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
LOC_Os04g42950 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00030815-RA No alias (at1g09540 : 235.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
PSME_00052193-RA No alias (at5g65790 : 223.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
PSME_00052620-RA No alias (at3g13540 : 220.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
Potri.001G336700 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.009G053900 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.012G080400 No alias myb domain protein 66 0.02 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.02 Orthogroups_2024-Update
Seita.1G250900.1 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
Seita.8G244100.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G196000.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Solyc01g010910 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRK4_SALMI) 0.03 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.02 Orthogroups_2024-Update
Sopen10g025190 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 144
No external refs found!