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  5. LOC_Os03g27080

LOC_Os03g27080


Description : calmodulin-binding transcription activator 2, putative, expressed


Gene families : OG_42_0000777 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000777_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g27080
Cluster HCCA clusters: cluster_0082

Target Alias Description ECC score Gene Family Method Actions
At1g67310 No alias Calmodulin-binding transcription activator 4... 0.02 Orthogroups_2024-Update
GRMZM2G447551 No alias Calmodulin-binding transcription activator protein with... 0.02 Orthogroups_2024-Update
Glyma.08G178900 No alias Calmodulin-binding transcription activator protein with... 0.02 Orthogroups_2024-Update
Glyma.17G038800 No alias Calmodulin-binding transcription activator protein with... 0.03 Orthogroups_2024-Update
PSME_00049068-RA No alias (at2g22300 : 387.0) Encodes a putative CAM binding... 0.02 Orthogroups_2024-Update
Potri.003G170600 No alias Calmodulin-binding transcription activator protein with... 0.02 Orthogroups_2024-Update
Potri.005G075100 No alias signal responsive 1 0.03 Orthogroups_2024-Update
Seita.2G395300.1 No alias CAMTA-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G380100.1 No alias CAMTA-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 394 413
IPR000048 IQ_motif_EF-hand-BS 370 389
IPR020683 Ankyrin_rpt-contain_dom 166 256
No external refs found!