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  5. LOC_Os03g27400

LOC_Os03g27400


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g27400
Cluster HCCA clusters: cluster_0141

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G193200 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
HORVU1Hr1G061370.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G056070.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Potri.016G059101 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Sopen07g004620 No alias MULE transposase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 20 99
No external refs found!