LOC_Os03g30260

Description : COBRA-like protein precursor, putative, expressed

Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g30260
Cluster	HCCA clusters: cluster_0014

Target	Alias	Description	ECC score	Gene Family Method
Brara.E03592.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	Orthogroups_2024-Update
HORVU5Hr1G025760.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	Orthogroups_2024-Update
Solyc02g065770	No alias	COBRA protein (AHRD V3.3 *** K4B708_SOLLC)	0.03	Orthogroups_2024-Update
Solyc02g089130	No alias	COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)	0.02	Orthogroups_2024-Update
Sopen03g033990	No alias	COBRA-like protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	InterProScan predictions
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	IEA	InterProScan predictions
BP	GO:0030198	extracellular matrix organization	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	InterProScan predictions
BP	GO:0040007	growth	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
BP	GO:0015977	carbon fixation	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	53	217

External Links

No external refs found!