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  5. Solyc07g052660

Solyc07g052660


Description : Blue copper protein (AHRD V3.3 *** W9S2S3_9ROSA)


Gene families : OG_42_0000026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g052660
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Mp2g05330.1 No alias Stellacyanin OS=Toxicodendron vernicifluum... 0.02 Orthogroups_2024-Update
Mp3g10810.1 No alias Cucumber peeling cupredoxin OS=Cucumis sativus... 0.03 Orthogroups_2024-Update
PSME_00028387-RA No alias (at2g32300 : 112.0) Encodes a uclacyanin, a protein... 0.02 Orthogroups_2024-Update
Potri.018G129400 No alias blue-copper-binding protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 35 113
No external refs found!