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  5. LOC_Os03g32230

LOC_Os03g32230


Description : ZOS3-12 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g32230
Cluster HCCA clusters: cluster_0129

Target Alias Description ECC score Gene Family Method Actions
Brara.J02815.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G112930.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g32220 No alias ZOS3-11 - C2H2 zinc finger protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g39960 No alias ZOS7-07 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
Seita.9G169700.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G035100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G025100.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G164600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g034450 No alias C2H2-type zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!