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  5. LOC_Os03g36550

LOC_Os03g36550


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os03g36550
Cluster HCCA clusters: cluster_0077

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G093900 No alias BED zinc finger ;hAT family dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.06G032801 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
HORVU1Hr1G018180.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g52310 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g02910 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Sopen08g011550 No alias hAT family C-terminal dimerisation region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR025525 hAT-like_transposase_RNase-H 438 544
IPR008906 HATC_C_dom 595 677
No external refs found!