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  5. LOC_Os03g41290

LOC_Os03g41290


Description : expressed protein


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g41290
Cluster HCCA clusters: cluster_0139

Target Alias Description ECC score Gene Family Method Actions
Bradi1g56167 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi1g58702 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi1g58864 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi2g01157 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g15627 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G074930.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G011290.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g15160 No alias OsFBX40 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!