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Description : RING/U-box superfamily protein (AHRD V3.3 *** AT2G42360.1)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc07g053420 | |
| Cluster | HCCA clusters: Cluster_289 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_36505 | No alias | e3 ubiquitin-protein ligase atl6 | 0.03 | Orthogroups_2024-Update | |
| Brara.D02285.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.D02849.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G135011 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G480106 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G222300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G028440.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G087960.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G121280.7 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Kfl00034_0310 | kfl00034_0310_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g08200 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g37740 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g24530 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_124750g0010 | No alias | (at5g01880 : 92.8) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_17362g0010 | No alias | (at5g06490 : 90.5) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_611616g0010 | No alias | (at1g49230 : 125.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_94359g0010 | No alias | (at4g35480 : 121.0) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
| PSME_00010570-RA | No alias | (at4g10150 : 105.0) RING/U-box superfamily protein;... | 0.05 | Orthogroups_2024-Update | |
| Potri.003G075200 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s257_3V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.02 | Orthogroups_2024-Update | |
| Seita.1G197500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Seita.1G197600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Seita.2G237900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.3G023500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.4G042500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.5G023000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G063750.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G110400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G157500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G158766.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G221100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g095180 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1) | 0.04 | Orthogroups_2024-Update | |
| Solyc11g005310 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) | 0.04 | Orthogroups_2024-Update | |
| Sopen01g032660 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen02g031720 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen04g004890 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
| MF | GO:0010333 | terpene synthase activity | IEP | Predicted GO |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Predicted GO |
| BP | GO:0022406 | membrane docking | IEP | Predicted GO |
| BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
| BP | GO:0051640 | organelle localization | IEP | Predicted GO |
| BP | GO:0140029 | exocytic process | IEP | Predicted GO |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 88 | 131 |
| No external refs found! |