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  5. LOC_Os03g41600

LOC_Os03g41600


Description : DUF260 domain containing protein, putative, expressed


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g41600
Cluster HCCA clusters: cluster_0075

Target Alias Description ECC score Gene Family Method Actions
Bradi3g35280 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.15G127900 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
LOC_Os01g39150 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_85817g0010 No alias (at1g07900 : 152.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
Potri.001G196400 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sopen11g030110 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 7 103
No external refs found!