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  5. LOC_Os03g42370

LOC_Os03g42370


Description : B3 DNA binding domain containing protein, expressed


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g42370
Cluster HCCA clusters: cluster_0144

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14495 No alias AP2/B3-like transcriptional factor family protein 0.02 Orthogroups_2024-Update
Bradi1g14550 No alias AP2/B3-like transcriptional factor family protein 0.02 Orthogroups_2024-Update
Bradi4g03000 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
LOC_Os03g42430 No alias B3 DNA binding domain containing protein, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 327 415
IPR003340 B3_DNA-bd 212 286
IPR003340 B3_DNA-bd 24 112
No external refs found!