LOC_Os03g42630

Description : No apical meristem protein, putative, expressed

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g42630
Cluster	HCCA clusters: cluster_0100

Target	Alias	Description	ECC score	Gene Family Method
Brara.G01268.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G174070	No alias	NAC domain containing protein 28	0.02	Orthogroups_2024-Update
Glyma.15G264100	No alias	NAC domain containing protein 20	0.04	Orthogroups_2024-Update
HORVU2Hr1G017350.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os06g23650	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
Potri.003G113000	No alias	NAC 007	0.03	Orthogroups_2024-Update
Potri.009G161300	No alias	NTM1-like 8	0.02	Orthogroups_2024-Update
Potri.017G139500	No alias	NAC domain containing protein 28	0.02	Orthogroups_2024-Update
Pp1s161_73V6	No alias	nac domain-containing	0.02	Orthogroups_2024-Update
Solyc02g036430	No alias	NAC domain protein, (AHRD V3.3 *** A0A061EDT4_THECC)	0.02	Orthogroups_2024-Update
Solyc03g115850	No alias	NAC domain-containing protein	0.02	Orthogroups_2024-Update
Solyc08g006020	No alias	NAC domain protein, (AHRD V3.3 - A0A061F8R9_THECC)	0.03	Orthogroups_2024-Update
Sopen03g023670	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update
Sopen06g021280	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update
Sopen07g031040	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update
Sopen08g001990	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	6	130

External Links

No external refs found!

LOC_Os03g42630

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation