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Description : zinc finger, C3HC4 type domain containing protein, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os03g44636 | |
| Cluster | HCCA clusters: cluster_0130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_29196 | No alias | ring-h2 finger protein atl72 | 0.03 | Orthogroups_2024-Update | |
| At2g35910 | No alias | RING-H2 finger protein ATL70... | 0.02 | Orthogroups_2024-Update | |
| At3g19140 | No alias | Putative RING-H2 finger protein ATL62... | 0.03 | Orthogroups_2024-Update | |
| At4g09130 | No alias | Putative RING-H2 finger protein ATL37... | 0.03 | Orthogroups_2024-Update | |
| Bradi3g05840 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.B02021.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.G00998.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.I00473.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I03307.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G017300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G191800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.17G050900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G036380.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| MA_10432957g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| PSME_00003022-RA | No alias | (at1g72200 : 164.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G306600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G233000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc04g082690 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc05g055140 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) | 0.03 | Orthogroups_2024-Update | |
| Solyc09g010650 | No alias | RING/U-box superfamily protein (AHRD V3.3 *-* AT2G37580.1) | 0.02 | Orthogroups_2024-Update | |
| Solyc10g011880 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
| MF | GO:0016843 | amine-lyase activity | IEP | Predicted GO |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 90 | 134 |
| No external refs found! |