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  5. LOC_Os03g46190

LOC_Os03g46190


Description : parafibromin, putative, expressed


Gene families : OG_42_0003860 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g46190
Cluster HCCA clusters: cluster_0043

Target Alias Description ECC score Gene Family Method Actions
PSME_00025394-RA No alias (at3g22590 : 375.0) Encodes PLANT HOMOLOGOUS TO... 0.02 Orthogroups_2024-Update
Solyc06g054080 No alias PHP (AHRD V3.3 *** A0A097PLE9_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR031336 CDC73_C 209 370
IPR032041 Cdc73_N 2 95
No external refs found!