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  5. LOC_Os03g46410

LOC_Os03g46410


Description : transmembrane protein 56, putative, expressed


Gene families : OG_42_0001426 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g46410
Cluster HCCA clusters: cluster_0081

Target Alias Description ECC score Gene Family Method Actions
Pp1s60_238V6 No alias hypothetical protein SORBIDRAFT_03g037990 [Sorghum bicolor] 0.02 Orthogroups_2024-Update
Seita.5G331800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc02g069350 No alias pectinesterase (Protein of unknown function, DUF538)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006634 TLC-dom 64 256
No external refs found!