LOC_Os03g46550


Description : RGH1A, putative, expressed


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g46550
Cluster HCCA clusters: cluster_0125

Target Alias Description ECC score Gene Family Method Actions
Bradi3g00741 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Bradi4g04662 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Bradi4g41708 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Bradi5g27069 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G017960.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G074260.1 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os08g07774 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g07580 No alias mla1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g13510 No alias stripe rust resistance protein Yr10, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g37780 No alias stripe rust resistance protein Yr10, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37770 No alias RGH1A, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G317500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G333400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G388700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G044800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G103500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G191800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G199800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G062900.4 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G223925.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G060900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G172900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G046200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 175 414
No external refs found!