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  5. LOC_Os03g46770

LOC_Os03g46770


Description : RNA recognition motif containing protein, expressed


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g46770
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
A4A49_27721 No alias glycine-rich rna-binding protein 0.02 Orthogroups_2024-Update
A4A49_55770 No alias glycine-rich rna-binding protein 0.02 Orthogroups_2024-Update
Brara.G03194.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
Glyma.01G232300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Glyma.11G255000 No alias glycine-rich RNA-binding protein 2 0.03 Orthogroups_2024-Update
MA_10430060g0020 No alias (at5g06210 : 98.2) RNA binding (RRM/RBD/RNP motifs)... 0.04 Orthogroups_2024-Update
MA_36092g0010 No alias (at5g61030 : 147.0) encodes a glycine-rich RNA binding... 0.02 Orthogroups_2024-Update
MA_481822g0010 No alias (at5g61030 : 139.0) encodes a glycine-rich RNA binding... 0.03 Orthogroups_2024-Update
MA_9972313g0010 No alias (at5g61030 : 113.0) encodes a glycine-rich RNA binding... 0.02 Orthogroups_2024-Update
Mp1g21200.1 No alias RNA editing factor (ORRM) 0.02 Orthogroups_2024-Update
PSME_00012406-RA No alias (at3g20930 : 101.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00055596-RA No alias (p49310|grp1_sinal : 142.0) Glycine-rich RNA-binding... 0.03 Orthogroups_2024-Update
Sobic.001G128200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g008210 No alias Glycine-rich RNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen10g023060 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 79
No external refs found!