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  5. LOC_Os03g47042

LOC_Os03g47042


Description : homeobox protein rough sheath 1, putative, expressed


Gene families : OG_42_0000234 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g47042
Cluster HCCA clusters: cluster_0090

Target Alias Description ECC score Gene Family Method Actions
Brara.B01915.1 No alias KNOX-type transcription factor 0.02 Orthogroups_2024-Update
Cre08.g375400 No alias KNOTTED-like homeobox of Arabidopsis thaliana 7 0.01 Orthogroups_2024-Update
GRMZM2G370332 No alias KNOTTED1-like homeobox gene 3 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR005541 KNOX2 126 172
IPR005540 KNOX1 71 107
No external refs found!