LOC_Os03g47820


Description : PINHEAD, putative, expressed


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g47820
Cluster HCCA clusters: cluster_0140

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G083500 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G031130.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10427420g0010 No alias (at1g48410 : 253.0) Encodes an RNA Slicer that... 0.02 Orthogroups_2024-Update
Potri.001G213700 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Potri.012G118700 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
Seita.7G201100.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 Orthogroups_2024-Update
Sobic.010G180800.2 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 Orthogroups_2024-Update
Sopen06g029890 No alias Piwi domain 0.02 Orthogroups_2024-Update
evm.model.contig_2082.8 No alias (at1g48410 : 352.0) Encodes an RNA Slicer that... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003100 PAZ_dom 408 531
IPR032473 Argonaute_Mid_dom 607 685
IPR032474 Argonaute_N 204 335
IPR003165 Piwi 704 1020
IPR032472 ArgoL2 542 596
IPR014811 ArgoL1 351 401
No external refs found!